This open-source bioinformatics software allows visualization of biological pathways and molecular interaction networks. Its platform is designed to help researchers with their molecular research.
Cytoscape is a powerful open source bioinformatics software platform that provides molecular interaction networks and biological pathways visualization, and the integration of these networks with annotations, gene expression profiles, and other state data. While originally created specifically for biological research, Cytoscape has since evolved to become a general platform for complex network analysis and visualization.
The Cytoscape core distribution comes with a basic set of features for data integration and visualization, and additional features are available via plugins. Users can access plugins for tasks such as network and molecular profiling analyses, new file format support, scripting, new layouts, and connecting with databases.
Developers have the ability to create plugins as well, using the Cytoscape open API which is based on Java technology. The software encourages plugin community development, which allows for a wide range of features to be available to users.
Overall, Cytoscape offers a flexible and customizable platform for researchers and analysts to study molecular interactions and pathways. With its versatile features and robust plugin community, it is a valuable tool for anyone working with network analysis and visualization.
The Cytoscape core distribution comes with a basic set of features for data integration and visualization, and additional features are available via plugins. Users can access plugins for tasks such as network and molecular profiling analyses, new file format support, scripting, new layouts, and connecting with databases.
Developers have the ability to create plugins as well, using the Cytoscape open API which is based on Java technology. The software encourages plugin community development, which allows for a wide range of features to be available to users.
Overall, Cytoscape offers a flexible and customizable platform for researchers and analysts to study molecular interactions and pathways. With its versatile features and robust plugin community, it is a valuable tool for anyone working with network analysis and visualization.
What's New
Version 2.6.2: N/A