This Java app simplifies haplotype analysis by creating a unified interface for tasks related to it.
One of the most significant benefits of Haploview is its compatibility with data dumps from both the HapMap project and the Perlegen Genotype Browser. This feature is immensely useful as it allows users to utilize an extensive range of pre-existing data, accelerating the research process significantly.
Another fantastic feature of Haploview is its ability to analyze thousands of SNPs, with its command-line mode increasing that capacity to tens of thousands, all while supporting thousands of individuals. That kind of power makes Haploview a leading option for researchers with significant amounts of data.
One necessary note: Haploview is licensed and distributed under the MIT license, with the terms and conditions clearly stated. Nevertheless, the software delivers all-around excellent functionality that can make haplotype research a much more efficient and comfortable process.
Version 4.1: N/A